The UT System Proteomics Network
Welcome to The University of Texas Systems Proteomics Network
PROTEOMICS
What is Proteomics?
Proteomics is the study of proteomes or the systematic analysis of proteins.
As defined by Merriam-Webster dictionary: a branch of biotechnology concerned with applying the techniques of molecular biology, biochemistry and genetics to analyzing the structure, function and interactions of the proteins produced by the genes of a particular cell, tissue or organism, with organizing the information in databases, and with applications of the data (as in medicine or biology).
It is pronounced as [pro•te•o•mics] (prOt-E-'O-miks) but not [proteonomics].
Proteomics was originally used for the large scale identification of proteins separated by 2D gel electrophoresis. However, proteomics now includes not only the analysis of all expressed protein analysis but also traditional protein structural studies such as protein identification, post-translational modification, protein-protein interactions and other functional interests related with protein structure.
Webinars on UT System Proteomics
- Dr. Steve Patrie, UTSW, Proteoform Webinar
- Dr. Gordon Mills, UT M.D. Anderson Cancer Center, RPPA and NanoString
- Dr. Susan Weintraub, UTHSC-SA, Proteomics Quantitation Data Independent Acquisition
- Dr. Jared Burks, UT M.D. Anderson Cancer Center, CyTOF Webinar Mass Cytometry, Composition to Construction
- Dr. Jennifer Brodbelt, UT-Austin, UVPD for Top Down Protein Analysis Native Mass Spectrometry for Analysis of Protein Complexes
- Dr. William Russell, UTMB, The UT System Proteomics Network
- Dr. Hongyu Wang, UTHealth Houston, Morphologically-Based Tissue Aptamer Selection for Ovarian Cancer Biomarker Discovery
- Dr. Saiful Chowdhury, UT-Arlington, Mass Spectrometry-Cleavable Chemical Approaches for Protein Interactions and Protein Modifications
- Dr. Maria Person, UT-Austin, Introduction to Proteomics
- Dr. Sheena D'Arcy, UT-Dallas, Introduction to Hydrogen-Deuterium Exchange (HDX) Mass Spectrometry, Part I Part II
- Dr. David Hawke, MDACC, 2018 ABRF Phosphoproteomics Study
- Dr. Hamid Mirzaei, UTSW, Developing Proteomics technologies to Facilitate Biological Discoveries
- Dr. Sheng Pan, UTHealth Houston, DIA Analysis of Clinical Plasma Samples
- Dr. Livia Eberlin, UT-Austin, Ambient Mass Spectrometry for Tissue Imaging and Cancer Diagnosis
- Dr. Yehia Mechref, Texas Tech, MS-Based Glycomics and Glycoproteomics: Enhancing the Toolbox
- Dr. Bhavin Patel, Thermo Scientific, Optimized Phosphopeptide Enrichment Workflows for Discovery and Targeted Mass Spectrometry Applications
- Dr. Brendan Prideaux, UTMB, Mass Spectrometry Imaging Approaches to Study Pharmacokinetics and Disease Pathogenesis
- Dr. Jeff Campbell, UT-Arlington, Overview of the Shimadzu Institute
- Dr. Han Liang, MDACC, The Cancer Proteome Atlas
- Dr. Arthur Laganowsky, Texas A&M, Mass Spectrometry of Intact Membrane Protein Complexes
- Dr. Erin Seeley, UT-Austin, UT Austin Mass Spectrometry Imaging Facility
Ion Sources
Proteome Software (Scaffold) Resource Library
Proteomics Lectures
- Maria Person's lecture from Spring 2016
- National Cancer Institute c. 2011
- University of Colorado Systems Biology Core Facility
Proteomics courses
- BroadE Workshop Proteomics Dec 2013
- BroadE Proteomics Dec. 2012
Additional educational links for proteomics are available at the UT Austin Proteomics Facility Wiki page.